References with Reference Peptides for Targeted Proteomics

References with Reference Peptides for Targeted Proteomics - SpikeTides™ & SpikeMix™

2023

Optimized Suspension Trapping Method for Phosphoproteomics Sample Preparation
Wang et al., Analytical Chemistry (2023) - PMID: 37319171
Domino-like effect of C112R mutation on ApoE4 aggregation and its reduction by Alzheimer’s Disease drug candidate
Nemergut et al., Molecular Neurodegeneration (2023) - PMID: 37280636
Overlaid transcriptional and proteome analyses identify mitotic kinesins as important targets of arylsulfonamide-mediated RBM39 degradation
Coomar et al., Molecular Cancer Research (2023) - PMID: 37171980
Discovery of Biomarkers for Amyotrophic Lateral Sclerosis from Human Cerebrospinal Fluid Using Mass-Spectrometry-Based Proteomics
Oh et al., Biomedicines (2023) - PMID: 37238921
Germ cell-specific proteins AKAP4 and ASPX facilitate identification of rare spermatozoa in non-obstructive azoospermia
Zhang et al., Molecular & Cellular Proteomics (2023) - PMID: 37087050
Angelman Syndrome causing UBE3A ligase displays predominantly synaptic ubiquitination activity in the mouse brain
Mayor et al., Research Square (2023)
Genetic analysis of rab7 mutants in zebrafish
Heutschi et al., BioRxiv (2023)
Phosphorylation-linked complex profiling identifies assemblies required for Hippo signal integration
Uliana et al., Molecular Systems Biology (2023) - PMID: 36896621
Endo-lysosomal protein concentrations in CSF from patients with frontotemporal dementia caused by CHMP2B mutation
Toft et al., Diagnosis, Assessment & Disease Monitoring (2023) - PMID: 36815874
Pertuzumab Charge Variant Analysis and ComplementarityDetermining Region Stability Assessment to Deamidation
Spanov et al., Analytical Chemistry (2023) - PMID: 36795375
Effects of all-trans and 9-cis retinoic acid on differentiating human neural stem cells in vitro
Kubickova et al., Toxicology (2023) - PMID: 36805305
Regulators of proteostasis are translationally repressed in fibroblasts from patients with sporadic and LRRK2-G2019S Parkinson’s disease
Flinkman et al., NPJ Parkinson's Disease (2023) - PMID: 36746972
Elucidating Fibroblast Growth Factor-induced kinome dynamics using targeted mass spectrometry and dynamic modeling
Veth et al., BioRxiv (2023)
Development of a quantitative proteomics approach for cyclooxygenases and lipoxygenases in parallel to quantitative oxylipin analysis allowing the comprehensive investigation of the arachidonic acid cascade
Hartung et al., Analytical and Bioanalytical Chemistry (2023) - PMID: 36683060

2022

Use of MS-GUIDE for identifcation of protein biomarkers for risk stratifcation of patients with prostate cancer
Goetze et al., Clinical Proteomics (2022)
Connecting multiple microenvironment proteomes uncovers the biology in head and neck cancer
Busso-Lopes et al., Nature Communications (2022)
Proteomic genotyping of SNP of Complement Factor H (CFH) Y402H and I62V using multiple reaction monitoring (MRM) assays
Kim et al., Scientific Reports (2022)
Stimulus-specific remodeling of the neuronal transcriptome through nuclear intron-retaining transcripts
Mazille et al., EMBO Jounrnal (2022)
CSF biomarker panels: Focus on synaptic pathology
Nilsson et al., DIssertation (2022)
Pro-inflammatory cytokines in aqueous humor from dogs with anterior uveitis and post-operative ocular hypertension following phacoemulsification, primary glaucoma, and normal healthy eyes
Terhaar et al., PLoS One (2022)
ADAM17-mediated EGFR ligand shedding directs macrophage-promoted cancer cell invasion
Gnosa et al., JCI Insight (2022)
Rational Design and Development of SARS-CoV‑2 Serological Diagnostics by Immunoprecipitation-Targeted Proteomics
Fu et al., Analytical Chemistry (2022)
Relative quantification of proteins in formalin-fixed paraffin-embedded breast cancer tissue using multiplexed mass spectrometry assays
Steiner et al., Cellular & Molecular Proteomics (2022)
Characterization of Cytochrome P450s with Key Roles in Determining Herbicide Selectivity in Maize
Brazier-Hicks et al., ACS Omega (2022)
Transcriptome profling and proteomic validation reveals targets of the androgen receptor signaling in the BT-474 breast cancer cell line
Vasiliou et al., Clinical Proteomics (2022)
Metabolic engineering of Clostridium ljungdahlii for the production of hexanol and butanol from CO2 and H2
Lauer et al., Microbial Cell Factories (2022) - PMID: 35568911
Prosit-TMT: Deep Learning Boosts Identification of TMT-Labeled Peptides
Gabriel et al., Analytical Chemistry (2022) - PMID: 35549156
Prosit-TMT: Deep Learning Boosts Identification of TMT-Labeled Peptides
Gabriel et al., Analytical Chemistry (2022) - PMID: 35549156
Targeted proteoform mapping uncovers specific Neurexin-3 variants required for dendritic inhibition
Hauser et al., Neuron (2022) - PMID: 35550065
Characterization of Cytochrome P450s with Key Roles in Determining Herbicide Selectivity in Maize
Brazier-Hicks et al., ACS Omega (2022)
Transcriptome profling and proteomic validation reveals targets of the androgen receptor signaling in the BT-474 breast cancer cell line
Vasiliou et al., Clinical Proteomics (2022)
Metabolic engineering of Clostridium ljungdahlii for the production of hexanol and butanol from CO2 and H2
Lauer et al., Microbial Cell Factories (2022) - PMID: 35568911
Systemic inflammation elevates cytosolic prolyl oligopeptidase protein expression but not peptidase activity in the cerebral cortices of familial Alzheimer`s disease modeling mice
Puris et al., Brain Disorders (2022)
Assignment of a Reference Value of Total Cow’s Milk Protein Content in Baked Cookies Used in an Interlaboratory Comparison
Breidbach et al., Foods (2022)
Absolute Quantification of Nav1.5 Expression by Targeted Mass Spectrometry
Adams et al., International Journal of Molecular Sciences (2022)
Widespread arginine phosphorylation in Staphylococcus aureus
Prust et al., Molecular and Cellular Proteomics (2022)
Enhanced ion mobility resolution of Abeta isomers from human brain using high‑resolution demultiplexing software
Mukherjee et al., Analytical and Bioanalytical Chemistry (2022)
Diagnosing pleural efusions using mass spectrometry‑based multiplexed targeted proteomics quantitating mid‑to high‑abundance markers of cancer, infection/infammation and tuberculosis
Robak et al., Scientific Reports (2022)
Alterations in blood proteins in the prodromal stage of bipolar II disorders
Lee et al., Scientific Reports (2022)
Quantification of the trans-synaptic partners neurexin-neuroligin in CSF of neurodegenerative diseases by parallel reaction monitoring mass spectrometry
Elena Camporesi et al., E Bio Medicine, (2022) - PMID: 34990894
Site-specific ubiquitination of MLKL targets it to endosomes and targets Listeria and Yersinia to the lysosomes
Seongmin Yoon et al., Cell Death & Differentiation, (2022)
Linking post-translational modifications and protein turnover by site-resolved protein turnover profiling
Jana Zecha et al., Nature Communications (2022) - PMID: 35013197
Mice harboring the FXN I151F pathological point mutation present decreased frataxin levels, a Friedreich ataxia‑like phenotype, and mitochondrial alterations
Marta Medina-Carbonero et al., Cellular & Molecular Life Sciences (2022) - PMID: 35038030

Archive

Mapping Protein Carboxymethylation Sites Provides Insights Into Their Role in Proteostasis and Cell Proliferation
Simone di Sanzo et al., Nature Communications (2021) - PMID: 34795246
Comparison of Hepatic Transporter Tissue Expression in Rodents and Interspecies Hepatic OCT1 Activity
Bridget L. Morse et al., The AAPS Journal (2021) - PMID: 33903987
Discovery of Biomarkers For Amyotrophic Lateral Sclerosis And Frontotemporal Lobar Gegeneration From Human Cerebrospinal Fluid Using Mass Spectrometry-Based Proteomics
Sungtaek Oh et al., Research Square (2021) - PMID: n.a.
Misincorporation Proteomics Technologies: A Review
Joel R. Steele et al., Proteomes (2021) - PMID: 33494504
R1441G But Not G201S Mutation Enhances LRRK2 Mediated Rab10 Phosphorylation in Human Peripheral Blood Neutrophils
Ying Fan et al., medRxiv (2021) - PMID: n.a.
Longitudinal CSF Proteomics Identifies NPTX2 as a Prognostic Biomarker of Alzheimer's Disease
Libiger, O. et al., Alzheimers & Dementia, (2021)
The N-terminal BRCT Domain Determines MCPH1 Function in Brain Development and Fertility
Xiaogian Liu et al., Cell Death DIs, (2021)
CSF Protein Level of Neurotransmitter Secretion, Synaptic Plasticity, and Autophagy in PD and DLB
Stefanie Lerche et al., Mov Disorder, (2021)
Down-Regulation of Phosphoenolpyruvate Carboxylase Kinase in Grapevine Cell Cultures and Leaves Is Linked to Enhanced Resveratrol Biosynthesis
Elías Hurtado-Gaitán et al., Biomolecules, (2021)
Stability Investigations of Cytochrome P450 (CYP) Enzymes Immediately After Death in a Pig Model Support the Applicability of Postmortem Hepatic CYP Quantification
Pedersen, K.W. et al., Pharmacol Research Perspectives, (2021)
Time-Resolved in Vivo Ubiquitinome Profiling by DIA-MS Reveals USP7 Targets on a Proteome-Wide Scale
Martin Steger et al., Nature Communications, (2021)
Characterization of Human CD4 T Cells Specific for a C-Peptide/C-Peptide Hybrid Insulin Peptide
Timothy A. Wiles et al., Front Immunol, (2021)
Evaluation of the Sensitivity and Reproducibility of Targeted Proteomic Analysis Using Data-Independent Acquisition for Serum and Cerebrospinal Fluid Proteins
Kyung-Cho, C. et al., J Proteome Res, (2021)
Reduced Level of Tear Antimicrobial and Immunomodulatory Proteins as a Possible Reason for Higher Ocular Infections in Diabetic Patients
Gergő Kalló et al., Pathogens, (2021)
Negative Regulation of Human Hepatic Constitutive Androstane Receptor by Cholesterol Synthesis Inhibition: Role of Sterol Regulatory Element Binding Proteins
Liberta Cuko et al., Drug Metabolism & Disposition, (2021)
Differential Detergent Fractionation of Membrane Protein From Small Samples of Hepatocytes and Liver Tissue for Quantitative Proteomic Analysis of Drug Metabolizing Enzymes and Transporters
Qasem, R.J. et al, J Pharm Sci, (2021)
Deficiency of Cathelicidin-related Antimicrobial Peptide Promotes Skin Papillomatosis in Mus musculus Papillomavirus 1-infected Mice
Sonja Dorfer et al., Acta Derm Venerol, (2021)
The Effect of Single Nucleotide Variations in the Transmembrane Domain of OATP1B1 on in vitro Functionality
Wilma Kiander et al., Pharmaceutical Research, (2021)
Association Between CSF Alpha-Synuclein Seeding Activity and Genetic Status in Parkinson’s Disease and Dementia with Lewy Bodies
Kathrin Brockmann et al., Acta Neurophathol Commun, (2021)
Identification of Potential Salivary Biomarker Panels for Oral Squamous Cell Carcinoma
Anu Jain et al., Sci Rep, (2021)
Proteomic Analysis of Urinary and Tissue‐Exudative Extracellular Vesicles to Discover Novel Bladder Cancer Biomarkers
Eisuke Tomiyama et al., Cancer Sci, (2021)
Lumbar and Ventricular CSF Concentrations of Extracellular Matrix Proteins Before and After Shunt Surgery in Idiopathic Normal Pressure Hydrocephalus
Karolina Minta et al., Fluids Barriers CNS, (2021)
Detection of Antimicrobial Peptides in Stratum Corneum by Mass Spectrometry
Adrienn Jenei et al., Int J Mol Sci, (2021)
Basement Membrane Collagen IV Deficiency Promotes Abdominal Aortic Aneurysm Formation
L.B. Steffensen et al., Sci Rep, (2021)
Acquisition of Ionic Copper by the Bacterial Outer Membrane Protein OprC Through a Novel Binding Site
Satya Prathyusha Bhamidimarri et al., PLoS Biol, (2021)
Comparison of Experimental Strategies to Study L-Type Amino Acid Transporter 1 (LAT1) Utilization by Ligands
Johanna Huttunen et al., Molecules, (2021)
Mass Spectrometry-Based Targeted Proteomics Method for the Quantification of Clinically Relevant Drug Metabolizing Enzymes in Human Specimens
Christoph Wenzel et al., J Chomatogr. B Analyt. Technol. Biomed. Life, (2021)
Mapping Protein Carboxymethylation Sites Provides Insights Into Their Role in Proteostasis and Cell Proliferation
Simone DiSanzo et al., Nature Communications, (2021)
Combined Targeted Proteomics and Oxylipin Metabolomicsfor Monitoring of the COX-2 Pathway
Nicole M. Hartung et al., Proteomics (2020) - PMID: 32875715
High-Throughput Assessment of Kinome-wide Activation States
Thierry Schmidlin et al., Cell Systems (2020) - PMID: 31521607
Targeted Mass Spectrometry for Serum Amyloid A (SAA) Isoform Profiling Insequential Blood Samples From Experimentally Staphylococcus Aureus Infected Pigs
Anna Barslund Leuchsenring et al., J Proteomics (2020) - PMID: 32702520
LC-HRMS/MS For The Simultaneous Determination of Four Allergens in Fish and Swine Food Products
Roberto Stella et al., Food Chemistry (2020) - PMID: 32540696
Development of a Targeted NanoLC-MS/MS Method For Quantitation of Residual Toxins From Bordetella Pertussis
Lisa Szymkowicz et al., Journal of Pharmaceutical and Biomedical Analysis (2020) - PMID: 32526622
Data, Reagents, Assays and Merits of Proteomics for SARS-CoV-2 Research and Testing
Zecha et al., Mol Cell Proteomics (2020) - PMID: 32591346
Proteomic Analysis Reveals a Biosignature of Decreased Synaptic Protein in Cerebrospinal Fluid of Major Depressive Disorder
Rami Al Shweiki et al., Translational Psychiatry (2020) - PMID: 32398672
Identification of Naturally Processed Mumps Virus Epitopes by Mass Spectrometry: Confirmation of Multiple CD8+ T-Cell Responses in Mumps Patients
Jelle de Wit et al., The Journal of Infectious Diseases (2020) - PMID: 31560392
Finding and Using Diagnostic Ions in Collision Induced Crosslinked Peptide Fragmentation Spectra
Barbara Steigenberger et al., International Journal of Mass Spectrometry (2020) - PMID: n.a.
Role of Organic Solute Transporter Alpha/Beta in Hepatotoxic Bile Acid Transport and Drug Interactions
James J Beaudoin et al., Toxicological Sciences (2020) - PMID: 32294204
A Multiple Reaction Monitoring Method For Determining Peanut (Arachis Hypogea) Allergens in Serum Using Quadrupole And Time-Of-Flight Mass Spectrometry
Charlotte M. Hands et al., Analytical and Bioanalytical Chemistry (2020) - PMID: 32125467
Adipophilin and Perilipin 3 Positively Correlate With Total Lipid Content in Human Breast Milk
Tereza Pavlova et al., Scientific Reports (2020) - PMID: 31941931
Quantification of Biomarkers for Beef Meat Qualities Using a Combination of Parallel Reaction Monitoring- And Antibody-Based Proteomics
Muriel Bonnet et al., Food Chemistry (2020) - PMID: 32078991
Adipophilin and Perilipin 3 Positively Correlate with Total Lipid Content in Human Breast Milk
Tereza Pavlova et al., Scientific Reports (2020) - PMID: 31941931
Co-Occurrence of Fe and P Stress in Natural Populations of the Marine Diazotroph Trichodesmium
Noelle A.Held et al., Biogeosciences (2020) - PMID: n.a.
A Conditional Knock-In to Study the Role, Function and Regulation of the Delta Opioid Receptor
Kimberly Fontes et al., Recontre interuniversitaire en pharmacologie (2019) - PMID: n.a.
Investigation of the Methylerythritol 4-Phosphate Pathway for Microbial Terpenoid Production Through Metabolic Control Analysis
Daniel Christoph Volke et al., Microbial Cell Factories (2019) - PMID: 31690314
Searching for Prognostic Biomarkers for Small Renal Masses in the Urinary Proteome
Ashley Di Meo et al., International Journal of Cancer (2019) - PMID: 31465112
A Hidden Human Proteome Encoded by ‘Non-Coding’ Genes
Shaohua Lu et al., Nucleric Acids Research (2019) - PMID: 31340039
Targeted Quantitative Proteomic Analysis of Drug Metabolizing Enzymes and Transporters by Nano LC-MS/MS in the Sandwich cultured Human Hepatocyte Model
Raju Khatri et al., Journal of Pharmacological and Toxicological Methods (2019) - PMID: 31158457
Abundance of Bacterial Type VI Secretion System Components Measured by Targeted Proteomics
Lin Lin et al., Nature Communications (2019) - PMID: 31197144
Biosynthetic Homeostasis and Resilience of the Complement System in Health and Infectious Disease
Esther Willems et al., EBioMedicine (2019) - PMID: 31262714
Integrated Transcriptomic and Proteomic Analysis of Primary Human Umbilical Vein Endothelial cells
Anil K. Madugundu et al., Proteomics (2019) - PMID: 30983154
Cost-Effective Automated Preparation of Serum Samples for Reproducible Quantitative Clinical Proteomics
Jihyeon Lee et al., Journal of Proteome Research (2019) - PMID: 30985128
Streptococcus Pyogenes Infection and the Human Proteome with a Special Focus on the Immunoglobulin G-cleaving Enzyme IdeS
Christofer A. Q. Karlsson et al., The American Society for Biochemistry and Molecular Biology (2019) - PMID: 29511047
Validation of Human MDR1-MDCK and BCRP-MDCK Cell Lines to Improve the Prediction of Brain Penetration
Bo Feng et al., Journal of Pharmaceutical Sciences (2019) - PMID: 30794795
Identification of Novel Transcripts and Peptides in Developing Murine Lens
Khan Shahid Y et al., Scientific Reports (2018) - PMID: 30042402
Mass Spectrometry Detection of Protein Allergenic Additives in Emulsion-Type Pork Sausages
Magdalena Montowska et al., Food Control (2019) - PMID: n.a.
Molecular Transport Through Primary Human Small Intestinal Monolayers by Culture on a Collagen Scaffold With a Gradient of Chemical Cross-Linking
Jennifer E. Speer et al., Journal of Biological Engineering (2019) - PMID: 31061676
The Reference Liver – ABC and SLC Drug Transporters in Healthy Donor and Metastatic Livers
Mateusz Kurzawski et al., Pharmacological Reports (2019) - PMID: n.a.
Targeted Mass Spectrometry Analysis of Clostridium Perfringens Toxins
Miloslava Duracova et al., Toxins (2019) - PMID: 30909561
First-Trimester Proteomic Profiling Identifies Novel Predictors of Gestational Diabetes Mellitus
Ravnsborg T et al., PLoS One (2019) - PMID: 30917176
Simultaneous Extraction and Analysis of Multiple Cystine-Dense Peptides by μSPE and Microflow-MS/MS From Plasma
Mi-Youn Brusniak et al., Methodology (2019) - PMID: 30892059
De Novo Production of Benzyl Glucosinolate in Escherichia Coli
Annette Petersen et al., Metabolic Engineering (2019) - PMID: 30831267
Identification of the OXA-48 Carbapenemase Family Using Tryptic Peptides and LC-MS/MS
Jeffrey R. Strich et al., Journal of Clinical Microbiology (2019) - PMID: 30814261
The Impact of the Glucagon-like Peptide 1 Receptor Agonistliraglutide on the Streptozotocin-Induced Diabetic Mousekidney Proteome
Leena Liljedahl et al., Physiological Reports (2019) - PMID: 30806030
Quality and Potency Profile of Eight Recombinant Isoallergens, Largely Mimicking Total Bet v 1‐Specific IgE Binding of Birch Pollen
Christian Seutter von Loetzen et al., Clinical & Experimental Allergy (2019) - PMID: 30706562
Proteome-Wide Onco-Proteogenomic Somatic Variant Identification in ER-Positive Breast Cancer
Lampros Dimitrakopoulos et al., Clinical Biochemistry (2019) - PMID: 30684468
Identification of Hybrid Insulin Peptides (HIPs) in Mouse and Human Islets by Mass Spectrometry
T. Aaron Wiles et al., Journal of Proteome Research (2018) - PMID: 30585061
Complement Activation Occurs at the Surface of Platelets Activated by Streptococcal M1 Protein and This Results in Phagocytosis of Platelets
Frida Palm et al., The Journal of Immunology (2018) - PMID: 30541884
Discovery and Quantification of Non-Human Proteins in Human Milk
Jing Zhu et al., J. Proteome Res. (2018) - PMID: 30489082
Alzheimer’s Disease Phenotype or Inflammatory Insult Does Not Alter Function of L-Type Amino Acid Transporter 1 in Mouse Blood-Brain Barrier and Primary Astrocytes
Mikko Gynther et al., Pharmaceutical Research (2019) - PMID: 30488131
CHESS: a New Human Gene Catalog Curated from Thousands of Large-Scale RNA Sequencing Experiments Reveals Extensive Transcriptional Noise
Mihaela Pertea et al., Genome Biology (2018) - PMID: 30486838
Discovery and Quantification of Non-Human Proteins in Human Milk
Jing Zhu et al., J. Proteome Res. (2018) - PMID: 30489082
Multiplex Assay for Quantification of Acute Phase Proteins and Immunoglobulin A in Dried Blood Spots
V Vidova et al., J Proteome Res. (2018) - PMID: 30408962
Multiple-Enzyme-Digestion Strategy Improves Accuracy and Sensitivity of Label- and Standard-Free Absolute Quantification to a Level That Is Achievable by Analysis with Stable Isotope-Labeled Standard Spiking
JR Wiśniewski et al., Journal of Proteome Research (2018) - PMID: 30336047
A Rapid Non‐Target Screening Method for Determining Prohibited Substances in Human Urine Using Liquid Chromatography/High‐Resolution Tandem Mass Spectrometry
Han et al., Drug Testing and Analysis (2018) - PMID: 30188018
Absolute Quantification of Targeted Meat and Allergenic Protein Additive Peptide Markers in Meat Products
Montowska et al., Food Chemistry (2018) - PMID: n.a.
Quantification of Protein Markers Monitoring the Pre‐Analytical Effect of Blood Storage Time Before Plasma Isolation Using 15N Metabolically Labeled Recombinant …
Ahn et al., Journal of Mass Spectrometry (2018) - PMID: n.a.
Dysregulation of Mucosal Membrane Transporters and Drug Metabolizing Enzymes in Ulcerative Colitis
Erdmann et al., Journal of Pharmaceutical Sciences (2018) - PMID: 30267783
Improving Selectivity and Sensitivity of Protein Quantitation by LC–HR–MS/MS: Determination of Somatropin in Rat Plasma
Bults et al., Bioanalysis (2018) - PMID: 29952231
Elucidation of Chemical Modifier Reactivity Towards Peptides and Proteins and the Analysis of Specific Fragmentation by MALDI‐CID‐MS2.
Rühl et al., Rapid Communications in Mass Spectrometry (2018) - PMID: 29964304
Cerebrospinal Fluid C-Reactive Protein in Parkinson's Disease: Associations with Motor and Non-motor Symptoms
Moghaddam et al., NeuroMolecular Medicine (2018) - PMID: 29980980
Extracellular Prolyl Oligopeptidase Derived from Activated Microglia is a Potential Neuroprotection Target
Natunen et al., Basic & Clinical Pharmacology & Toxicology (2018) - PMID: 29998529
ProteomeTools: Systematic Characterization of 21 Post-Translational Protein Modifications by LC-MS/MS Using Synthetic Peptides
Zolg et al., Molecular and Cellular Proteomics (2018) - PMID: 29848782
Analysis of Histone Modifications by Mass Spectrometry
Moritz Carl Völker‐Albert et al., Current Protocols in Protein Science (2018) - PMID: 18429056
PROCAL: A Set of 40 Peptide Standards for Retention Time Indexing, Column Performance Monitoring and Collision Energy Calibration
Zolg et al., Proteomics (2017) - PMID: 28872757
Quantification of Urinary Protein Biomarkers of Autosomal Dominant Polycystic Kidney Disease by Parallel Reaction Monitoring
Rauniyar et al., Proteomics Clin Appl. (2018) - PMID: 29573172
Mining the Human Tissue Proteome for Protein Citrullination
Chien-Yun Lee et al., Molecular and Cellular Proteomics (2018) - PMID: 29610271
Parsing and Quantification of Raw Orbitrap Mass Spectrometer Data Using RawQuant
Kovalchik et al., J. Proteome Res. (2018) - PMID: 29682972
Targeted Mass Spectrometry-Based Assays for Relative Quantification of Thirty Brain-Related Proteins and their Clinical Applications
Begcevic et al., J. Proteome Res. (2018) - PMID: 29708756
ProteomeTools: Systematic Characterization of 21 Post-Translational Protein Modifications by LC-MS/MS Using Synthetic Peptides
Zolg et al., Mol. Cell. Proteomics (2018) - PMID: n.a.
Exploration of Micro-LC/HRMS for Quantification of Low Abundant Endogenous Truncated Amyloid Beta Peptides in Human Cerebrospinal Fluid
Meyer et al., Poster (2017) - PMID: n.a.
Quantitative Proteomics and SWATH-MS to Elucidate Peri-Receptor Mechanisms in Human Salt Taste Sensitivity
Stolle et al., Food Chemistry (2018) - PMID: n.a.
SpikeTides™ for Subcellular Marker Proteins offer Improved Analysis of Complex Plant Samples
Cornelia et al., JPT Peptide Technologies (2017) - PMID: n.a.
An MRM-Based Cytokeratin Marker Assay as a Tool for Cancer Studies: Application to Lung-Cancer Pleural Effusions
Perzanowska et al., Proteomics Clin Appl. (2017) - PMID: 29352525
A 14-Protein Signature for Rapid Identification of Poor Prognosis Stage III Metastatic Melanoma
Sykes et al., Proteomics Clin Appl. (2017) - PMID: 29227041
A Comparative VUV Absorption Mass-Spectroscopy Study on Protonated Peptides of Different Size
Egorov et al., Phys Chem Chem Phys. (2017) - PMID: 28731105
Nitric Oxide Prevents Aft1 Activation and Metabolic Remodeling in Frataxin-deficient Yeast
Alsina et al., Redox Biology (2017) - PMID: 28918000
Validating Missing Proteins in Human Sperm Cells by Targeted Mass Spectrometry-and Antibody-based Methods
Carapito et al., J Proteome Res. (2017) - PMID: 28891297
Prioritizing Popular Proteins in Liver Cancer: Remodelling One-Carbon Metabolism
Rezeli et al., J Proteome Res. (2017) - PMID: 28738677
MRM3-Based LC-MS Multi-Method for the Detection and Quantification of Nut Allergens
Korte et al., Anal Bioanal Chem. (2016) - PMID: 27590318
Quantitation of 87 Proteins by nLC-MRM/MS in Human Plasma: Workflow for Large-scale Analysis of Biobank Samples
Rezeli et al., J Proteome Res. (2017) - PMID: 28738677
Identification of Host Proteins Predictive of Early Stage Mycobacterium Tuberculosis Infection
Bark et al., EBioMedicine (2017) - PMID: 28655597
Improvements in Mass Spectrometry Assay Library Generation for Targeted Proteomics
Teleman et al., Journal of Proteome Research (2017) - PMID: 28516777
Proteomics Investigation of OSCC-Specific Salivary Biomarkers in a Hungarian Population Highlights the Importance of Identification of Population-Tailored Biomarkers
Csősz et al., PLOS ONE (2017) - PMID: 28545132
Optimization by Infusion of Multiple Reaction Monitoring Transitions for Sensitive Quantification of Peptides by Liquid Chromatography/mass Spectrometry
Alghanem et al., Rapid Communications in Mass Spectrometry (2017) - PMID: n.a.
Targeted Proteomics and Absolute Protein Quantification for the Construction of a Stoichiometric Host-pathogen Surface Density Model
Sjöholm et al., Mol Cell Proteomics (2017) - PMID: 28183813
Cervical Cancer Cell Line Secretome Highlights the Roles of Transforming Growth Factor-Beta-Induced Protein ig-h3, Peroxiredoxin-2, and NRF2 on Cervical Carcinogenesis
Kontostathi et al., BioMed Research (2017) - PMID: n.a.
Building ProteomeTools Based on a Complete Synthetic Human Proteome
Zolg et al., Nature Methods (2017) - PMID: 28135259
Targeted Proteomics for Multiplexed Verification of Markers of Colorectal Tumorigenesis
Uzozie et al., Mol Cell Proteomics (2017) - PMID: 28062797
Proteomic Analyses of Limbic Regions in Neonatal Male, Female and Androgen Receptor Knockout Mice
Zettergren et al., BMC neuroscience (2017) - PMID: 28056817
The Discovery and Validation of Novel Protein and Peptide Biomarkers
Nicey et al., Amino Acids, Peptides and Proteins (2016) - PMID: n.a.
The Endosomal Transcriptional Regulator RNF11 Integrates Degradation and Transport of EGFR
Scharaw et al., J Cell Biology (2016) - PMID: 27872256
Proteomic Analysis of Primary Human Airway Epithelial Cells Exposed to the Respiratory Toxicant Diacetyl
Foster et al., Journal of Proteome Research (2016) - PMID: 27966365
Multiplexed Mass Spectrometry Monitoring of Biomarker Candidates for Osteoarthritis
Fernández-Puente et al., Journal of Proteomics (2016) - PMID: 27865793
A New HPLC-MS Method for the Detection of Lobster and Shrimp Allergens in Food Samples Via MRM and MRM³
Korte et al., Journal of Agricultural and Food Chemistry (2016) - PMID: 27391354
Selected Reaction Monitoring Mass Spectrometry for Relative Quantification of Proteins Involved in Cellular Life and Death Processes
Birkler et al., Journal of Chromatography (2016) - PMID: 27686847
Oral Colostrum Priming Shortens Hospitalization Without Changing the Immunomicrobial Milieu
Romano-Keeler et al., Journal of Perinatology (2016) - PMID: 27684425
Human SRMAtlas: A Resource of Targeted Assays to Quantify the Complete Human Proteome
Kusebauch et al., Cell (2016) - PMID: n.a.
Quantitative Mass Spectrometry to Study Inflammatory Cartilage Degradation and Resulting Interactions with the Complement System
Melin Fürst et al., Journal of Immunology (2016) - PMID: 27630166
A Novel Peptidomic Approach to Strain Typing of Clinical Acinetobacter Baumannii Isolates Using Mass Spectrometry
Wang et al., Clinical Chemistry (2016) - PMID: 27117471
Endomyocardial Proteomic Signature Corresponding to the Response of Patients with Dilated Cardiomyopathy to Immunoadsorption Therapy
Bhardwaj et al., Journal of Proteomics (2016) - PMID: 27616206
MRM3-Based LC-MS Multi-Method for the Detection and Quantification of Nut Allergens
Korte et al., Analytical and Bioanalytical Chemistry (2016) - PMID: 27590318
Quantification of Angiotensin II-Regulated Proteins in Urine of Patients with Polycystic and Other Chronic Kidney Diseases by Selected Reaction Monitoring
Konvalinka et al., Clinical Proteomics (2016) - PMID: 27499720
The Kinetics of Angiotensin-I Metabolism in Human Carotid Atheroma: An Emerging Role for Angiotensin (1–7)
Nehmea et al., Vascular Pharmacology (2016) – PMID: 27497910
Human SRMAtlas: A Resource of Targeted Assays to Quantify the Complete Human Proteome
Kusebauch et al., Cell (2016) – PMID: 27453469
Assessment of SRM, MRM3 and DIA for the Targeted Analysis of Phosphorylation Dynamics in Non-Small Cell Lung Cancer
Schmidlin et al., Proteomics (2016) - PMID: 27219855
RePLiCal: A QconCAT Protein for Retention Time Standardisation in Proteomics Studies
Holman et al., J Proteome Res. (2016) - PMID: 26775667
Molecular Serum Signature of Treatment Resistant Depression
Ruland et al., Psychopharmacology (2016) - PMID: 27325393
Impact of Serum and Plasma Matrices on the Titration of Human Inflammatory Biomarkers Using Analytically Validated SRM Assays
Dupin et al., J Proteome Res. (2016) - PMID: 27322794
Changes in the Chemical Barrier Composition of Tears in Alzheimer's Disease Reveal Potential Tear Diagnostic Biomarkers
Kalló et al., PLoS One (2016) - PMID: 27327445
Design and Expression of a QconCAT Protein to Validate Hi3 Protein Quantification of Influenza Vaccine Antigens
Smith et al., Journal of Proteomics (2016) - PMID: 27343760
A Multiplexed Cytokeratin Analysis Using Targeted Mass Spectrometry Reveals Specific Profiles in Cancer-Related Pleural Effusions
Domanski et al., Neoplasia (2016) - PMID: n.a.
Proteomic Analysis of Breast Tumors Confirms the mRNA Intrinsic Molecular Subtypes Using Different Classifiers: Large-Sale Analysis of Fresh Frozen Tissue Samples
Waldemarson et al., Breast Cancer Res. (2016) - PMID: 27357824
Assessment of SRM, MRM3 and DIA for the Targeted Analysis of Phosphorylation Dynamics in Non-small Cell Lung Cancer
Schmidlin et al., Proteomics (2016) - PMID: 27219855
Using LC-MS Based Methods for Testing the Digestibility of a Non-Purified Transgenic Membrane Protein in Simulated Gastric Fluid
Skinner et al., J Agric Food Chem. (2016) - PMID: 27255301
Global Protein Oxidation Profiling Suggests Efficient Mitochondrial Proteome Homeostasis During Aging
Ramallo Guevara et al., Mol Cell Proteomics (2016) - PMID: 26884511
Meta-Markers for the Differential Diagnosis of Lung Cancer and Lung Disease
Kim et al., J Proteomics (2016) - PMID: 27168012
Cdc42 and Rac1 Activity is Reduced in Human Pheochromocytoma and Correlates with FARP1 and ARHGEF1 Expression
Croisé et al., Endocr Relat Cancer (2016) - PMID: 26911374
Protein Biomarker Discovery and Fast Monitoring for the Identification and Detection of Anisakids by Parallel Reaction Monitoring (PRM) Mass Spectrometry
Carrera et al., J Proteomics (2016) - PMID: 27195811
Signatures of Evolutionary Adaptation in Quantitative Trait loci Influencing Trace Element Homeostasis in Liver
Engelken et al., Mol Biol Evol. (2015) - PMID: 26582562
Biomarker Development for Intraductal Papillary Mucinous Neoplasms Using Multiple Reaction Monitoring Mass Spectrometry
Kim et al., J. Proteome Res (2015) - PMID: 26561977
Development and Validation of a Novel Plasma Protein Signature for Breast Cancer Diagnosis by Using Multiple Reaction Monitoring-based Mass Spectrometry
Lee et al., Anticancer Research (2015) - PMID: 26504062
Quantitative Phosphoproteomics Revealed Glucose-stimulated Responses of Islet Associated with Insulin Secretion
Li et al., J Proteome Res. (2015) - PMID: 26437020
High Resolution Parallel Reaction Monitoring with Electron Transfer Dissociation for Middle-Down Proteomics
Sweredoski et al., Anal Chem. (2015) - PMID: 26176279
Shear Stress Mediates Exocytosis of Functional TRPV4 Channels in Endothelial Cells
Baratchi et al., Cell Mol Life Sci. (2015) - PMID: 26289129
Highly Abundant Defense Proteins in Human Sweat as Revealed by Targeted Proteomics and Label-Free Quantification Mass Spectrometry
Csősz et al., J Eur Acad Dermatol Venereol. (2015) - PMID: 26307449
Using Data Independent Acquisition (DIA) to Model High-responding Peptides for Targeted Proteomics Experiments
Searle et al., Mol. Cell. Proteomics (2015) - PMID: 26100116
Non-Invasive Prognostic Protein Biomarker Signatures Associated with Colorectal Cancer
Surinova et al., EMBO Mol Med. (2015) - PMID: 26253080
Selected Reaction Monitoring Mass Spectrometry for Absolute Protein Quantification
Manes et al., J Vis Exp. (2015) - PMID: 26325288
Diet-Induced Neuropeptide Expression; Feasibility of Quantifying Extended and Highly Charged Endogenous Peptide Sequences by Selected Reaction Monitoring
Schmidlin et al., Anal Chem. (2015) - PMID: 26376940
Host Protein Biomarkers Identify Active Tuberculosis in HIV Uninfected and Co-infected Individuals
Achkar et al., EBioMedicine (2015) - PMID: n.a.
Prediction of Colorectal Cancer Diagnosis Based on Circulating Plasma Proteins
Surinova et al., EMBO Mol Med. (2015) - PMID: 26253081
Divergent Responses of Atlantic Coastal and Oceanic Synechococcus to Iron Limitation
Mackey et al., PNAS. (2015) - PMID: 26216989
Relative Quantification of Human β‐Defensins By a Proteomics Approach Based on Selected Reaction Monitoring
Kalló et al., Rapid Commun. Mass Spectrom. (2015) - PMID: n.a
Phosphoproteomic Analysis of Aurora Kinase Inhibition in Monopolar Cytokinesis
Polat et al., J Proteome Res. (2015) - PMID: 26270265
ETD Outperforms CID and HCD in the Analysis of the Ubiquitylated Proteome
Porras-Yakushi et al., J Am Soc Mass Spectrom. (2015) - PMID: 25994767
Quantitative Proteomics Suggests Decrease in the Secretogranin‐1 Cerebrospinal Fluid Levels During the Disease Course of Multiple Sclerosis
Kroksveen et al., PROTEOMICS (2015) - PMID: 26152395
Protein Degradation Corrects for Imbalanced Subunit Stoichiometry in OST Complex Assembly
Mueller et al., Mol Biol Cell. (2015) - PMID: 25995378
A Targeted Proteomics Approach for Precision Plant Breeding
Chawade et al., J Proteome Res. (2015) - PMID: 26704985
Attenuation of Pattern Recognition Receptor Signaling is Mediated by a MAP Kinase Kinase Kinase
Mithoe et al., EMBO Rep. (2015) - PMID: 26769563
Chromatographic Behavior of Peptides Containing Oxidized Methionine Residues in Proteomic LC–MS Experiments: Complex Tale of a Simple Modification
Lao et al, Journal of Proteomics (2015) - PMID: 26025879
Pathway-Centric Analysis of the DNA Damage Response to Chemotherapeutic Agents in Two Breast Cell Lines
Antberg et al., EuPA Open Proteomics (2015) - PMID: n.a.
Signal Transduction Reaction Monitoring Deciphers Site-Specific PI3K-mTOR/MAPK Pathway Dynamics in Oncogene-Induced Senescence
de Graaf et al., J. Proteome Res. (2015) - PMID: 26011226
Novel Biological Substrates of Human Kallikrein 7 Identified Through Degradomics
Yu et al., Journal of Biological Chemistry (2015) - PMID: Journal of Biological Chemistry (2015)
Development of a Selected Reaction Monitoring (SRM) Method for Absolute Quantitation of MYDGF/C19orf10 Protein
Dwivedi et al., Proteomics Clin Appl. (2015) - PMID: 26537655
Using Data Independent Acquisition to Model High-Responding Peptides for Targeted Proteomics Experiments
Searle et al., Mol Cell Proteomics (2015) - PMID: 26100116
An N-Terminal Formyl Methionine on COX 1 is Required for the Assembly of Cytochrome c Oxidase
Hinttala et al., Hum. Mol. Genet. (2015) - PMID: 25911677
A Combined Shotgun and Targeted Mass Spectrometry Strategy for Breast Cancer Biomarker Discovery
Sjöström et al., J Proteome Res. (2015) - PMID: 25944384
Evaluation of iTRAQ and SWATH-MS for the Quantification of Proteins Associated with Insulin Resistance in Human Duodenal Biopsy Samples
Bourassa et al., PLoS One (2015) - PMID: 25950531
Multiple Biomarker Ser for Breast Cancer Diagnosis, Method of Detecting the Same, and Diagnosis Kit for Breast Cancer Using Antibody Against the Same
Lee et al., US Patent 20,150,024,960, (2015) - PMID: n.a.
Development and Evaluation of a Multiplexed Mass Spectrometry-Based Assay for Measuring Candidate Peptide Biomarkers in Alzheimer's Disease Neuroimaging Initiative (ADNI) CSF
Spellman et al., Proteomics Clin Appl. (2015) - PMID: 25676562
Application of an LC-MS/MS Method for the Simultaneous Quantification of Human Intestinal Transporter Proteins Absolute Abundance using a QconCAT Technique
Harwood et al., Journal of Pharmaceutical and Biomedical Analysis (2015) - PMID: n.a.
Methionine to Isothreonine Conversion as a Source of False Discovery Identifications of Genetically Encoded Variants in Proteogenomics
Chernobrovkin et al., Journal of Proteomics (2015) - PMID: 25779464
Absolute Quantification of the Total and Anti-drug antibody-bound Concentrations of Recombinant Human α-glucosidase in Human Plasma Using protein-G Extraction and LC-MS/MS
Bronsema et al., Anal Chem. (2015) - PMID: 25802928
Mass Spectrometric Quantification of Histone Post-translational Modifications by a Hybrid Chemical Labeling Method
Maile et al., Mol. Cell. Proteomics (2015) - PMID: 25680960
A Multiplexed, Targeted Mass Spectrometry Assay of the S100 Protein Family Uncovers the Isoform-Specific Expression in Thyroid Tumours
Martinez-Aguilar et al., BMC Cancer Sample (2015) - PMID: n.a.
Quantitative Proteomics of Bronchoalveolar Lavage Fluid in Idiopathic Pulmonary Fibrosis
Foster et al., J of Proteome Research (2015) - PMID: 25749006
Characterization of a Human Pluripotent Stem Cell‐derived Model of Neuronal Development Using Multiplexed Targeted Proteomics
Dunkley et al., Proteomics Clin Appl. (2015) - PMID: 25684324
An Assessment of Human Gastric Fluid Composition as a Function of PPI Usage
Foltz et al., Physiological Reports (2015) - PMID: 25626870
Quantitative Variability of 342 Plasma Proteins in a Human Twin Population
Liu et al., Mol Syst Biol. (2015) - PMID: n.a.
Optimizing the Identification of Citrullinated Peptides by Mass Spectrometry
Bennike et al., (2014) - PMID: n.a.
Multiple Nutrient Stresses at Intersecting Pacific Ocean Biomes Detected by Protein Biomarkers
Saito et al., Science (2014) - PMID: 25190794
High Density and Ligand Affinity Confer Ultrasensitive Signal Detection by a Guanylyl Cyclase Chemoreceptor
Pichlo et al., J Cell Biol. (2014) - PMID: 25135936
Detection of 22kDa and 20kDa GH Proteoforms in Human Plasma by LC-MS/MS
Such-Sanmartín et al., Biochim Biophys Acta. (2014) - PMID: 25556001
Data Processing has Major Impact on the Outcome of Quantitative Label-free LC-MS Analysis
Chawade et al., J Proteome Res. (2014) - PMID: 25407311
Natural Genetic Variation Impacts Expression Levels of Coding, Non-coding, and Antisense Transcripts In Fission Yeast
Clément-Ziza et al., Mol Syst Biol. (2014) - PMID: 25432776
AID Expression in B-Cell Lymphomas Causes Accumulation of Genomic Uracil and a Distinct AID Mutational Signature
Pettersen et al., DNA Repair (2014) - PMID: n.a.
Assessment of the Influence of the Patient’s Inflammatory State on the Accuracy of a Haptoglobin Selected Reaction Monitoring Assay
Lassout et al. , Clinical Proteomics (2014) - PMID: n.a.
Using Synthetic Peptides to Benchmark Peptide Identification Software and Search Parameters for MS/MS Data Analysis
Quandt et al., EuPA Open Proteomics, (2014) - PMID: n.a.
A Targeted Multiplexed Proteomic Investigation Identifies Ketamine-induced Changes in Immune Markers in Rat Serum and Expression Changes in Protein Kinases/phosphatases in Rat Brain
Wesseling et al., J Proteome Res. (2014) - PMID: 25363195
Targeted Multiplexed Selected Reaction Monitoring Analysis Evaluates Protein Expression Changes of Risk Factors for Psychiatric Disorders
Wesseling et al., International Journal of Neuropsychopharmacology (2014) - PMID: n.a.
Proteomic Enrichment Analysis of Psychotic and Affective Disorders Reveals Common Signatures in Presynaptic Glutamatergic Signalling and Energy Metabolism
Gottschalk et al., International Journal of Neuropsychopharmacology (2014) - PMID: n.a.
Revealing the Amino Acid Composition of Proteins Within an Expanded Genetic Code
Aerni et al., Nucleic Acids Res. (2014) - PMID: 25378305
N-Capping Motifs Promote Interaction of Amphipathic Helical Peptides with Hydrophobic Surfaces and Drastically Alter Hydrophobicity Values of Individual Amino Acids
Spicer et al., Analytical Chemistry (2014) - PMID: 25372782
Distinct Proteomic Profiles in Post-mortem Pituitary Glands from Bipolar Disorder and Major Depressive Disorder Patients
Stelzhammer et al., Journal of Psychiatric Research (2014) - PMID: n.a.
Measurement of Glycosylated Alpha-Fetoprotein Improves Diagnostic Power over the Native Form in Hepatocellular Carcinoma
Kim et al., PlosOne (2014) - PMID: 25310463
Integrated Solid Phase Extraction – Capillary Liquid Chromatography (speLC) Interfaced to ESI-MS/MS for Fast Characterization and Quantification of Protein and Proteomes
Falkenby et al., J Proteome Res. (2014) - PMID: 25277625
CTX-M-1 β-Lactamase Expression in Escherichia coli is Dependent on Cefotaxime Concentration, Growth Phase and Gene Location
Kjeldsen et al., Antimicrob Chemother. (2014)
Induction of Complementary Function Reductase Enzymes in Colon Cancer Cells by Dithiole-3-thione versus Sodium Selenite
Erzinger et al., J Biochem Mol Toxicol. (2014) - PMID: 25179160
Identification of the Transcription Factor ZEB1 As a Central Component of the Adipogenic Gene Regulatory Network
Gubelmann et al., eLife Sci. (2014) - PMID: 25163748
Development of a Method for Absolute Quantification of Equine Acute Phase Proteins Using Concatenated Peptide Standards and Selected Reaction Monitoring
Bundgaard et al., J Proteome Res. (2014) - PMID: 25250876
The Proteome of Cholesteryl-Ester-Enriched Versus Triacylglycerol-Enriched Lipid Droplets
Khor et al., PLoS One (2014) - PMID: 25111084
Proteomic Analysis of Post Mortem Brain Tissue From Autism Patients: Evidence for Opposite Changes in Prefrontal Cortex and Cerebellum in Synaptic Connectivity-related Proteins
Broek et al., Molecular Autism (2014) - PMID: n.a.
Elongation Factor Methyltransferase 3 – A Novel Eukaryotic Lysine Methyltransferase
Zhang et al., Biochem Biophys Res Commun. (2014) - PMID: 25086354
De Novo Identification and Quantification of Single Amino-Acid Variants in Human Brain
Zhi-Duan Su et al., J Mol Cell Biol. (2014) - PMID: 25007923
Identification of Psoriatic Arthritis Mediators in Synovial Fluid by Quantitative Mass Spectrometry
Cretu et al., Clinical Proteomics (2014) - PMID: n.a.
Integrative Proteomic Analysis of the NMDA NR1 Knockdown Mouse Model Reveals Effects on Central and Peripheral Pathways Associated with Schizophrenia and Autism Spectrum Disorders
Wesseling et al., Molecular Autism (2014) - PMID: n.a
Glycoproteomic Analysis of Prostate Cancer Tissues by SWATH Mass Spectrometry Discovers N-acylethanolamine Acid Amidase and Protein Tyrosine Kinase 7 as Signatures for Tumor Aggressiveness
Liu et al., Mol. Cell. Proteomics. (2014) - PMID: 24741114
Absolute Quantification of the Kdp Subunits of Escherichia coli by Multiple Reaction Monitoring
Surmann et al., Proteomics (2014) - PMID: 24829208
Circulating Proteolytic Signatures of Chemotherapy-Induced Cell Death in Humans discovered by N-Terminal Labeling
Wilta et al., PNAS ( 2014) - PMID: n.a
Mass-Spectrometry-Based Draft of the Human Proteome
Wilhelm et al., Nature (2014) - PMID: 24870543
A Draft Map of the Human Proteome
Kim et al., Nature (2014) - PMID: 24870542
Levels of Germination Proteins in Bacillus subtilis Dormant, Superdormant, and Germinating Spores
Chen et al., PLoS ONE (2014) - PMID:24752279
Absolute Quantitation of Glycosylation Site Occupancy Using Isotopically Labeled Standards and LC-MS
Zhu et al., Journal of The American Society for Mass Spectrometry (2014) - PMID: 24671695
Glycoproteomic Analysis of Prostate Cancer Tissues by SWATH Mass Spectrometry Discovers N-Acylethanolamine Acid Amidase and Protein Tyrosine Kinase 7 as Signatures for Tumor Aggressiveness
Liu et al., Mol Cell Proteomics. (2014) - PMID: 24741114
Probing the Exposure of the Phosphate Group in Modified Amino Acids and Peptides by Ion-molecule Reactions with Triethoxyborane in Fourier Transform ion Cyclotron Resonance Mass Spectrometry
Lanucara et al., Rapid Commun Mass Spectrom. (2014) - PMID: 24711274
Serum Proteomic Analysis Identifies Sex-Specific Differences in Lipid Metabolism and Inflammation Profiles in Adults Diagnosed with Asperger Syndrome
Steeb et al., Mol. Autism (2014) - PMID: 24467795
Assessment of Peptide Chemical Modifications on the Development of an Accurate and Precise Multiplex Selected Reaction Monitoring Assay for Apolipoprotein E Isoforms
Martínez-Morillo et al., J. Proteome Res. (2014) - PMID: 24392642
Stoichiometry of Saccharomyces Cerevisiae Lysine Methylation: Insights Into Non-Histone Protein Lysine Methyltransferase Activity
Hart-Smith et al., J. Proteome Res. (2014) - PMID: 24517342
Both Targeted Mass Spectrometry and Flow Sorting Analysis Methods Detected the Decreased Serum Apolipoprotein E Level in Alzheimer's Disease Patients
Han et al., Mol. Cell Proteomics (2014) - PMID: 24319058
Key Intestinal Genes Involved in Lipoprotein Metabolism are Downregulated in Dyslipidemic Men with Insulin Resistance
Couture et al., J. Lipid Res. (2014) - PMID: 24142110
PfHPRT: A New Biomarker Candidate of Acute Plasmodium Falciparum Infection
Thézénas et al., J Proteome Research (2013) - PMID: 23339668
Impaired Tryptic Proteolytic Activity at Citrullinated Amino Acids
Bennike et al., (2013) - PMID: n.a.
Targeted Proteomics Reveals Strain-Specific Changes in the Mouse Insulin and Central Metabolic Pathways after a Sustained High-Fat Diet
Sabidó et al., Molecular Systems Biology (2013) - PMID: 23860498
In Vitro Reconstitution of an mRNA-Transport Complex Reveals Mechanisms of Assembly and Motor Activation
Heym et al., J. Cell Biol. (2013) - PMID: 24368805
Rejection of Leukemic Cells Requires Antigen-Specific T Cells with High Functional Avidity
Vincent et al., Biol Blood Marrow Transplant (2013) - PMID: 24161924
Comparison of Targeted Peptide Quantification Assays for Reductive Dehalogenases by Selective Reaction Monitoring (SRM) and Precursor Reaction Monitoring (PRM)
Schiffmann et al., Anal Bioanal Chem. (2013) - PMID: 24220761
A Proteomics Approach to the Identification of Biomarkers for Psoriasis Utilising Keratome Biopsy
Williamson et al., J Proteomics (2013) - PMID: 24061002
The E3 Ligase Parkin Maintains Mitochondrial Integrity by Increasing Linear Ubiquitination of NEMO
Müller-Rischart et al. Mol Cell. (2013) - PMID: 23453807
Corrigendum: Global Quantification of Mammalian Gene Expression Control
Schwanhäusser et al., Nature (2013) - PMID: 23407496
Identification of a Seven Glycopeptide Signaturefor Malignant Pleural Mesothelioma in Human Serum by Selected Reaction Monitoring
Cerciello et al., Clinical Proteomics (2013) - PMID: 24207061
The E3 Ubiquitin Ligase UBE3C Enhances Proteasome Processivity by Ubiquitinating Partially Proteolyzed Substrates
Chu et al., J. Biol. Chem. (2013) - PMID: 24158444
Identification of a Novel Proteoform of Prostate Specific Antigen (SNP-L132I) in Clinical Samples by Multiple Reaction Monitoring
Végvári et al., Mol. Cell. Proteomics. (2013) - PMID: 23842001
High-Sensitivity LC-MS/MS Quantification of Peptides and Proteins in Complex Biological Samples: the Impact of Enzymatic Digestion and Internal Standard Selection on Method Performance
Bronsema et al., Anal Chem. (2013) - PMID: 24010948
Targeted Identification of SUMOylation Sites in Human Proteins Using Affinity Enrichment and Paralog-specific Reporter Ions
Lamoliatte et al., Mol. Cell. Proteomics (2013) - PMID: 23750026
Investigations on Collectin Liver 1
Axelgaard et al., J. Biol. Chem. (2013) - PMID: 23814060
The Mtb Proteome Library: A Resource of Assays to Quantify the Complete Proteome of Mycobacterium Tuberculosis
Schubert et al., Cell Host & Microbe (2013) - PMID: 23684311
Absolute Quantification of Transcription Factors During Cellular Differentiation Using Multiplexed Targeted Proteomics
Simicevic et al., nature methods (2013) - PMID: 23584187
Targeted Proteomics Reveals Strain-Specific Changes in the Mouse Insulin and Central Metabolic Pathways After a Sustained High-Fat Diet
Sabido et al., Molecular Systems Biology (2013) - PMID: 23860498
Apoe, Mbl2, and Psp Plasma Protein Levels Correlate with Diabetic Phenotype in NZO Mice—An Optimized Rapid Workflow for SRM-Based Quantification
von Toerne et al., J. Proteome Res. (2013) - PMID: 23350727
Label-Free Selected Reaction Monitoring Enables Multiplexed Quantitation of S100 Protein Isoforms in Cancer Cells
Martínez-Aguilar et al., J. Proteome Res. (2013) - PMID: 23782132
Targeted Identification of SUMOylation Sites in Human Proteins Using Affinity Enrichment and Paralog-specific Reporter Ions
Lamoliatte et al., Mol Cell Proteomics (2013) - PMID: 23750026
Seminal Plasma as a Source of Prostate Cancer Peptide Biomarker Candidates for Detection of Indolent and Advanced Disease
Neuhaus et al., PLOS ONE (2013) - PMID: 23826311
Multiple Reaction Monitoring of Multiple Low-Abundance Transcription Factors in Whole Lung Cancer Cell Lysates
Kim et al., Journal of the Proteome Research (2013) - PMID: 23586733
Automatic Generation of Predictive Dynamic Models Reveals Nuclear Phosphorylation as the Key Msn2 Control Mechanism
Sunnåker et al., Sci. Signal. (2013) - PMID: 23716718
N-Glycoprotein SRMAtlas: A Resource of Mass-spectrometric Assays for N-glycosites Enabling Consistent and Multiplexed Protein Quantification for Clinical Applications
Hüttenhain et al., Mol Cell Proteomics. (2013) - PMID: 23408683
PfHPRT: A New Biomarker Candidate of Acute Plasmodium falciparum Infection
Thezenas et al., J. Proteome Res (2013) - PMID: 23339668
Systematic Measurement of Transcription Factor-DNA Interactions by Targeted Mass Spectrometry Identifies Candidate Gene Regulatory Proteins
Mirzaei et al., PNAS (2013) - PMID: 23388641
A Complete Mass-Spectrometric Map of the Yeast Proteome Applied to Quantitative Trait Analysis
Picotti et al., Nature (2013) - PMID: 23334424
Development of a Multiplex Selected Reaction Monitoring Assay for Quantification of Biochemical Markers of Down Syndrome in Amniotic Fluid Samples
Martinez-Morillo et al., J. Proteome Res., (2012) - PMID: 22681384
Identification of Differentially Expressed Proteins in Direct Expressed Prostatic Secretions of Men with Organ-confined Versus Extracapsular Prostate Cancer
Kim et al., Mol Cell Proteomics (2012) - PMID: 22986220
15N Labeled Brain Enables Quantification of Proteome and Phosphoproteome in Cultured Primary Neurons
Liao et al. J Proteome Res. (2012) - PMID: 22070516
Urine Proteome of Autosomal Dominant Polycystic Kidney Disease Patients
Bakun et al., Clinical Proteomics (2012) - PMID: 23228063
Occurrence and Detection of Phosphopeptide Isomers in Large-Scale Phosphoproteomics Experiments
Courcelles et al., Journal of Proteome Research (2012) - PMID: 22668510
Using iRT, a Normalized Retention Time for more Targeted Measurement of Peptides
Reiter et al., Proteomics (2012) - PMID: 22577012
Automated Workflow for Large-Scale Selected Reaction Monitoring Experiments
Malmström et al., Journal of Proteome Research (2012) - PMID: 22283722
Peptides Quantification by Liquid Chromatography with Matrix-Assisted Laser Desorption/Ionization and Selected Reaction Monitoring Detection
Lesur et al., Journal of Proteome Research (2012) - PMID: 22897511
Range of Protein Detection by Selected/multiple Reaction Monitoring Mass Spectrometry in an Unfractionated Human Cell Culture Lysate
Ebhardt et al., PROTEOMICS, Volume 12 (2012) - PMID: 22577020
An Improved Quantitative Mass Spectrometry Analysis of Tumor Specific Mutant Proteins at High Sensitivity
Cañás et al., PROTEOMICS, Volume 12 (2012) - PMID: 22589181
Precision of Heavy–Light Peptide Ratios Measured by MALDI-TOF Mass Spectrometry
Anderson et al., Journal of Proteome Research (2012) - PMID: 22257466
Automated Selected Reaction Monitoring Software for Accurate Label-Free Protein Quantification
Teleman et al., Journal of Proteome Research (2012) - PMID: 22658081
High-Throughput SISCAPA Quantitation of Peptides from Human Plasma Digests by Ultrafast, Liquid Chromatography-Free Mass Spectrometry
Razavi et al., Journal of Proteome Research (2012) - PMID: 23126378
Cell Surface Proteome of the Marine Planctomycete Rhodopirellula baltica
Hieu et al., PROTEOMICS, Volume 12 (2012) - PMID: 22623273
Large-Scale Quantitative Assessment of Different In-Solution Protein Digestion Protocols Reveals Superior Cleavage Efficiency of Tandem Lys-C/Trypsin Proteolysis over Trypsin Digestion
Glatter et al., Journal of Proteome Research (2012) - PMID: 23017020
Reproducible Quantification of Cancer-Associated Proteins in Body Fluids Using Targeted Proteomics
Hüttenhain et al., Science Translational Medicine (2012) - PMID: 22786679
Targeted Proteomics of the Eicosanoid Biosynthetic Pathway Completes an Integrated Genomics-Proteomics-Metabolomics Picture of Cellular Metabolism
Sabido et al., Mol Cell Proteomics. (2012) - PMID: 22361236
Candidate Hippocampal Biomarkers of Susceptibility and Resilience to Stress in a Rat Model of Depression
Henningsen et al., Mol Cell Proteomics. (2012) - PMID: 22311638
Chimeras Taking Shape: Potential Functions of Proteins Encoded by Chimeric RNA Transcripts
Frenkel-Morgenstern et al., Genome Res. (2012) - PMID: 22588898
Quantification of Matrix Metalloprotease-9 in Bronchoalveolar Lavage Fluid by Selected Reaction Monitoring with Microfluidics Nano-Liquid-Chromatography–Mass Spectrometry
Prely et al., Journal of Chromatography (2012) - PMID: 22464002
Quantotypic Properties of QconCAT Peptides Targeting Bovine Host Response to Streptococcus uberis
Bislev et al., J. Proteome Res. (2012) - PMID: 22256911
Streptococcus Pyogenes in Human Plasma: ADAPTIVE MECHANISMS ANALYZED BY MASS SPECTROMETRY-BASED PROTEOMICS
Malmström et al., J. Biol. Chem. (2012) - PMID: 22117078
Protein Expression Changes in Ovarian Cancer during the Transition from Benign to Malignant
Waldemarson et al., J. Proteome Res. (2012) - PMID: 22471520
Estimation of Absolute Protein Quantities of Unlabeled Samples by Selected Reaction Monitoring Mass Spectrometry
Ludwig et al., Mol. Cell. Proteomics (2012) - PMID: 19012428
SpikeTides™—Proteotypic Peptides for Large-Scale MS-Based Proteomics
Schnatbaum et al., Nature Methods (2011)
Recent Workshops of the HUPO Human Plasma Proteome Project (HPPP): A bridge with the HUPO CardioVascular Initiative and the emergence of SRM targeted proteomics
Omenn et al., PROTEOMICS, Volume 11 (2011) - PMID: 21850651
mProphet: Automated Data Processing and Statistical Validation for Large-scale SRM Experiments
Reiter et al., Nature Methods (2011) - PMID: 21423193
ATAQS: A computational Software Tool for High Throughput Transition Optimization and Validation for Selected Reaction Monitoring Mass Spectrometry
Brusniak et al., BMC Bioinformatics (2011) - PMID: 21414234
Comprehensive Quantitative Analysis of Central Carbon and Amino-Acid Metabolism in Saccharomyces Cerevisiae Under Multiple Conditions by Targeted Proteomics
Costenoble et al.,Mol Syst Biol. (2011) - PMID: 21283140
A Quantitative Targeted Proteomics Approach to Validate Predicted microRNRNA Targets in C. elegans
Jovanovic et al., Nature Methods (2010) - PMID: 20835247
Targeted In-Gel MRM: A Hypothesis Driven Approach for Colorectal Cancer Biomarker Discovery in Human Feces
Ching-Seng Ang et al., Journal of Proteome Research (2010) - PMID: 20684568
Synthetic 1 Peptide Arrays for Pathway-Level Protein Monitoring by Liquid Chromatography-Tandem Mass Spectrometry
Hewel et al., Mol. Cell. Proteomics (2010) - PMID: 20467045
High-Throughput Generation of Selected Reaction-Monitoring Assays for Proteins and Proteomes
Picotti et al., Nature Methods (2009) - PMID: 19966807
Extracellular Histones are Major Mediators of Death in Sepsis
Xu et al., Nat Med. (2009) - PMID: 19855397
Full Dynamic Range Proteome. Analysis of S. Cerevisiae by Targeted Proteomics
Picotti et al., Cell (2009) - PMID: 19664813
Quantitative Urinary Proteome Analysis for Biomarker Evaluation in Chronic Kidney Disease
Jantos-Siwy et al., Journal of Proteome Research (2009) - PMID: 19012428

Peptides for Targeted Proteomics - SpikeTides™ SpikeMix for Targeted Proteomics