Fluorescent Peptides & Dye Labeled Peptides
Fluorescent peptides are indispensable tools in the fields of molecular biology, biochemistry, and biotechnology. These peptides, labeled with fluorescent dyes, are used extensively for protein binding and localization studies, enabling researchers to track and visualize various biological processes with high precision.
High-Quality Fluorescent Peptide Synthesis
At JPT Peptide Technologies, we specialize in fluorescent peptide synthesis, providing tailored solutions to meet your specific research needs. With over 20 years of expertise in peptide manufacturing, we offer a broad range of fluorescent peptides with various modifications and high purity levels. Our state-of-the-art laboratories in Berlin, Germany, operate under strict regulations, ensuring the highest quality standards in peptide synthesis.
Incorporation of Fluorescent Labels in Peptides
Fluorescent labels can be incorporated at many positions in the fluorescent peptides. Typically, these labels are added at the N-terminus or at specific amino acid side chains like Cysteine (Cys) and Lysine (Lys). Below, we provide a detailed list of commonly used fluorescent dyes and fluorescence labels and their attachment options:
Fluorophore Short Name | Full Name | Excitation / Emission Wavelength |
---|---|---|
Abz | Anthranilyl, 2-Aminobenzoyl |
320 nm |
N-Me-Abz | N-Methyl-anthranilyl, N-Methyl-2-Aminobenzoyl |
340-360 nm |
FITC | Fluoresceinisothiocyanate (5 or 6 isomer or mixture of isomers) |
490 nm |
5-FAM | 5-Carboxyfluorescein |
492 nm |
6-FAM | 6-Carboxyfluorescein |
492 nm |
TAMRA | Carboxytetramethyl rhodamine (5 or 6 isomer or mixture of isomers) |
543 nm |
Mca | 7-Methoxycoumarinyl-4-acetyl |
325 nm |
AMCA / Amc | Aminomethylcoumarin Acetate |
350 nm |
Dansyl | 5-(Dimethylamino) naphthalene-1-sulfonyl | 342 nm 562 nm |
EDANS | 5-[(2-Aminoethyl)amino] naphthalene-1-sulfonic acid |
340 nm |
Atto | e.g. Atto465, Atto488, Atto495, Atto550, Atto647 |
453 nm |
Cy3 | 1-(5-carboxypentyl)-3,3-dimethyl-2-((1E,3E)-3-(1,3,3-trimethylindolin-2-ylidene)prop-1-en-1-yl)-3H-indol-1-ium chloride |
550 nm |
Cy5 | 1-(5-carboxypentyl)-3,3-dimethyl-2-((1E,3E,5E)-5-(1,3,3-trimethylindolin-2-ylidene)penta-1,3-dienyl)-3H-indolium chloride |
650 nm |
Alexa Fluor | e.g. Alexa Fluor 647, Alexa488, Alexa532, Alexa546, Alexa594, Alexa633, Alexa647 |
650 nm |
Bodipy | e.g. Bodipy® FL |
505 nm |
Dylight | e.g. DyLight 488, DyLight 550 |
493nm |
Trp | Tryptophan |
280 nm |
Lucifer Yellow (ethylene diamine) | 6-Amino-2-(2-amino-ethyl)-1,3-dioxo-2,3-dihydro-1H-benzo[de]isoquinoline-5,8-disulfonic acid |
430 nm |
Custom Fluorescent Peptide Solutions
Tailored to Your Research Needs
Whether you require fluorescent peptide synthesis for high-throughput screening, detailed protein interaction studies, or specific localization applications, JPT Peptide Technologies has you covered. Our team of experts will work closely with you to design and produce peptides that meet your exact specifications, including peptide purity levels ranging from crude up to >98% and optional modifications like phospho, biotin, dye labels, cyclization, conjugation, and stable-isotope labeling.
Applications of Fluorescent Peptides
- Protein Binding Studies: Fluorescent peptides are widely used to investigate protein interactions, helping researchers understand binding affinities and specificities.
- Localization Studies: By tagging peptides with fluorescent labels, scientists can visualize the distribution and dynamics of peptides within cells and tissues.
- High-Throughput Screening: Our high-capacity synthesis capabilities allow for the production of tens of thousands of peptides per month, ideal for large-scale screening projects.
Advanced Fluorescent Labeling of Peptides
Our fluorescent labeling of peptides process ensures precise incorporation of various fluorophores, tailored to your experimental needs. This includes the incorporation of popular dyes like FITC, TAMRA, Cy3, Cy5, Alexa Fluor, and many others, each offering distinct advantages depending on your application requirements.

Contact Us for Your Fluorescent Peptide Needs
Discover the difference that high-quality, custom fluorescent peptides can make in your research. Contact JPT Peptide Technologies today to discuss your project and learn more about our comprehensive peptide synthesis services.