Alanine Scanning Library

use of the alanine scanning analysis

What Is an Alanine Scanning Library?

An Alanine Scanning Library is a powerful research tool used to study the function of individual amino acids within a peptide or protein. This method involves systematically replacing each amino acid, one at a time, with alanine, a small, non-polar residue. Alanine substitution helps determine which residues are essential for biological activity, molecular binding, or protein structure. Since alanine does not significantly disrupt the protein backbone, it provides a clear view of the importance of side-chain interactions. 


Applications of Alanine Scanning Libraries

Alanine scanning is widely used across various research and development fields to uncover functional details in peptides and proteins. By identifying which amino acids are essential for activity or interaction, these libraries support a range of scientific goals, including:

  • Epitope mapping; Identify key residues involved in antibody or T cell recognition.

  • Receptor-ligand analysis; Determine which parts of a peptide or protein are critical for binding.

  • Protein engineering; Guide the design of more stable or functional protein variants.

  • Drug discovery and development; Pinpoint molecular targets and optimize lead compounds.

  • Enzyme mechanism studies; Reveal which residues contribute to catalytic activity.

These applications make alanine scanning a powerful strategy for improving molecular understanding and advancing biomedical research.

JPT’s Specialization in Alanine Scanning Libraries

JPT offers custom-designed Alanine Scanning Libraries with exceptional precision and quality, supporting detailed structure-function analysis of peptides and proteins. With extensive experience in peptide synthesis and high-throughput screening, JPT delivers libraries tailored to your sequence and research goals—whether for epitope mapping, binding studies, or drug development. Our solutions are trusted by researchers worldwide for their reliability, reproducibility, and scientific impact.

Available Alanine Scanning Library Formats

Peptide Modifications

Custom Peptide Libraries

Amount: from 1 mg per peptide
Purity: Crude to 95%
Delivery Format:  96 MTP or Individual Tubes 
Customized Modifications




Peptide Modifications

Peptide Microarrays

Peptides printed on array
Low to high density
Flexible microarray layout
Ideal for identifying key residues




Peptide Modifications

Custom Peptide Synthesis

Amount: from 1 mg up to gram scale
Purity: Crude to >95%
Format: Customizable upon request
Tailored to your specific research needs




Why Researchers Trust JPT

Researchers worldwide rely on JPT for alanine scanning due to our commitment to quality, precision, and customer support. Our advanced synthesis techniques ensure highly pure and accurate peptide variants, while customized designs meet specific research needs. Key reasons for choosing JPT include:

These strengths make JPT a trusted partner in peptide research and discovery.

Collaborate with JPT for Customized Solutions

Work with JPT to access high-quality, tailored peptide libraries designed to support your research goals. We provide precise synthesis, quick delivery, and dedicated technical assistance. Contact us at peptide@jpt.com  to learn how we can help advance your project or request for a quote. You can also read more about our Peptide Library and Pool Design Services

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